WormBase Tree Display for CDS: C05D12.3c
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C05D12.3c | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C05D12 | |||
Structure | Source_exons (15) | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q2PJ78 | ||
UniProt | UniProtAcc | Q2PJ78 | ||||
AlphaFold | entry | Q2PJ78 | ||||
NCBI_protein | GI_number | GI:83764272 | ||||
Protein_id | CHROMOSOME_II | CAJ55249 | 1 | |||
DB_remark | contains similarity to Interpro domain IPR036465 (von Willebrand factor A-like domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | NDB | BJ808720 | |||
Visible | Gene | WBGene00014666 | ||||
Corresponding_transcript | C05D12.3c.1 | |||||
C05D12.3c.2 | ||||||
C05D12.3c.3 | ||||||
Corresponding_protein | CE39469 | |||||
Corresponding_oligo_set (13) | ||||||
Matching_cDNA (13) | ||||||
Microarray_results | 175077_s_at | |||||
A_12_P135110 | ||||||
GPL13394_WBGene00014666 | ||||||
GPL13914_C05D12.3 | ||||||
GPL14144_C05D12.3a_2907-2966_0.959_5_A | ||||||
GPL19516_CGZ0002595 | ||||||
GPL19516_CGZ0002596 | ||||||
GPL19516_CGZ0002597 | ||||||
GPL19516_CGZ0002598 | ||||||
GPL19516_CGZ0002599 | ||||||
GPL21109_C05D12.3a.1 | ||||||
GPL21109_C05D12.3c.1 | ||||||
GPL8304_CE_WBGene00014666_A | ||||||
GPL8673_C05D12_3aP02136 | ||||||
GPL8673_C05D12_3cP02136 | ||||||
GPL8673_C05D12_3cP02482 | ||||||
GPL8673_C05D12_3cP02898 | ||||||
Brief_identification | EGF-like domain-containing protein | Accession_evidence | UniProt | TR:Q2PJ78 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 08 Dec 2005 00:00:00 | WBPerson1983 | ||||
Remark | [051208 pad] Gene prediction entered to represent alternate splicing of the 3' end. Protein homology illudes to the use of a different frame to maintain coding integrity further 3' but based on this genomic sequence and transcript support the gene prediction terminates shortly after splicing into the final exon. | Accession_evidence | NDB | BJ808720 | ||
Curator_confirmed | WBPerson1983 | |||||
Method | curated |