WormBase Tree Display for CDS: C01G10.10a
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| C01G10.10a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C01G10 | |||
| Structure | Source_exons | 1 | 92 | |||
| 147 | 270 | |||||
| 315 | 463 | |||||
| 516 | 679 | |||||
| 800 | 1086 | |||||
| 1705 | 1831 | |||||
| 1882 | 1996 | |||||
| 2046 | 2253 | |||||
| DB_info | Database | KEGG | KEGG_id | 2.3.1.234 | ||
| SwissProt | UniProtAcc | Q93170 | ||||
| UniProt | UniProtAcc | Q93170 | ||||
| UniProt_GCRP | UniProtAcc | Q93170 | ||||
| AlphaFold | entry | Q93170 | ||||
| NCBI_protein | GI_number | GI:3873878 | ||||
| Protein_id | CHROMOSOME_V | CAB02716 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00814 (tRNA N6-adenosine threonylcarbamoyltransferase); contains similarity to Interpro domains IPR043129 (ATPase, nucleotide binding domain), IPR017861 (Kae1/TsaD family), IPR000905 (Gcp-like domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | From_analysis | RNASeq_Hillier_elegans | ||||
| Visible | Gene | WBGene00007237 | ||||
| Corresponding_transcript | C01G10.10a.1 | |||||
| Corresponding_protein | CE20480 | |||||
| Corresponding_PCR_product | cenix:38-h10 | |||||
| mv_C01G10.10 | ||||||
| sjj_C01G10.10 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (28) | ||||||
| RNAi_result | WBRNAi00062100 | |||||
| WBRNAi00092957 | ||||||
| WBRNAi00039321 | ||||||
| WBRNAi00028288 | ||||||
| WBRNAi00009925 | ||||||
| WBRNAi00001721 | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial | Accession_evidence | UniProt | SP:Q93170 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
