WormBase Tree Display for CDS: Bm4532a
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Bm4532a | Evidence | Curator_confirmed | WBPerson4055 | ||
---|---|---|---|---|---|
Inferred_automatically | make_isoforms.pl | ||||
SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
Structure | Source_exons | 1 | 123 | ||
373 | 537 | ||||
798 | 1001 | ||||
1363 | 1518 | ||||
1791 | 1904 | ||||
2167 | 2697 | ||||
DB_info | DB_remark | BMA-UNC-24 protein; contains similarity to Pfam domains PF01145 (SPFH domain / Band 7 family), PF02036 (SCP-2 sterol transfer family); contains similarity to Interpro domains IPR036013 (Band 7/SPFH domain superfamily), IPR001107 (Band 7 domain), IPR001972 (Stomatin/HflK family), IPR003033 (SCP2 sterol-binding domain), IPR036527 (SCP2 sterol-binding domain superfamily), IPR043202 (Band-7 stomatin-like) | |||
Origin | From_laboratory | HX | |||
Species | Brugia malayi | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | RATT | ||||
Prediction_status | Confirmed | ||||
Isoform | Curator_confirmed | WBPerson4055 | |||
Visible | Gene | WBGene00224793 | |||
Corresponding_transcript | Bm4532a.1 | ||||
Bm4532a.2 | |||||
Corresponding_protein | BM19348 | ||||
Matching_cDNA | IsoSeq_brugia_PB_5870_6 | Inferred_automatically | transcript_builder.pl | ||
AI096239 | Inferred_automatically | transcript_builder.pl | |||
IsoSeq_brugia_PB_5870_4 | Inferred_automatically | transcript_builder.pl | |||
brugia_GG3377|c12_g2_i2 | Inferred_automatically | transcript_builder.pl | |||
brugia_GG3377|c12_g2_i3 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM (10) | |||||
Last_reviewed | 10 May 2019 14:44:15 | WBPerson4055 | |||
Remark | [131112 pad] Renamed from Bm4532b as this is a single Isoform locus. | Curator_confirmed | WBPerson1983 | ||
Method | curated |