WormBase Tree Display for CDS: Bm3186b
expand all nodes | collapse all nodes | view schema
| Bm3186b | Evidence | Curator_confirmed | WBPerson4055 | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Bm_v4_Chr3_scaffold_001 | ||
| Structure | Source_exons | 1 | 60 | ||
| 220 | 378 | ||||
| 510 | 590 | ||||
| 766 | 903 | ||||
| 1174 | 1347 | ||||
| 1424 | 1497 | ||||
| 1579 | 1729 | ||||
| 1929 | 2036 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A0J9Y5X5 | |
| UniProt | UniProtAcc | A0A0J9Y5X5 | |||
| AlphaFold | entry | A0A0J9Y5X5 | |||
| Protein_id | Bm_v4_Chr3_scaffold_001 | CDQ02499 | 1 | ||
| DB_remark | BMA-UNC-87 protein; contains similarity to Pfam domain PF00402 (Calponin family repeat); contains similarity to Interpro domain IPR000557 (Calponin repeat) | ||||
| Origin | From_laboratory | HX | |||
| Species | Brugia malayi | ||||
| Properties | Coding | CDS | |||
| CDS_predicted_by | exonerate | ||||
| Prediction_status | Confirmed | ||||
| Isoform | Inferred_automatically | xace | |||
| Visible | Gene | WBGene00223447 | |||
| Corresponding_transcript | Bm3186b.1 | ||||
| Corresponding_protein | BM45650 | ||||
| RNASeq_FPKM (10) | |||||
| Last_reviewed | 11 Aug 2017 16:41:42 | WBPerson4055 | |||
| Remark | [170811 mh6] replaced the dubious exonerate model with the cloned sequence | Curator_confirmed | WBPerson4055 | ||
| Method | curated |
