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WormBase Tree Display for CDS: Bm3186a

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Name Class

Bm3186aEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceBm_v4_Chr3_scaffold_001
StructureSource_exons134
38003901
43854494
46544812
49445024
52005337
56085781
58585931
60136163
63636470
DB_infoDatabaseTrEMBLUniProtAccA0A1I9G602
UniProtUniProtAccA0A1I9G602
AlphaFoldentryA0A1I9G602
Protein_idBm_v4_Chr3_scaffold_001CDQ024981
DB_remarkBMA-UNC-87 protein; contains similarity to Pfam domain PF00402 (Calponin family repeat); contains similarity to Interpro domain IPR000557 (Calponin repeat)
OriginFrom_laboratoryELG
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byexonerate
Prediction_statusConfirmed
IsoformInferred_automaticallyxace
VisibleGeneWBGene00223447
Corresponding_transcriptBm3186a.1
Bm3186a.2
Corresponding_proteinBM41239
Matching_cDNAbrugia_GG1884|c19_g1_i4Inferred_automaticallytranscript_builder.pl
AW160044Inferred_automaticallytranscript_builder.pl
AW042002Inferred_automaticallytranscript_builder.pl
brugia_GG1884|c19_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG1884|c19_g1_i2Inferred_automaticallytranscript_builder.pl
AI052937Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000078106.092From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
112.211From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
154.394From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
156.933From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
49.5848From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
51.9949From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
58.4664From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:000008043.3947From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
46.1744From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
83.5145From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
92.0342From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (23)
WBls:00000821038.11From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
1052.25From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
1064.57From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
413.352From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
463.603From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
WBls:0000083 (80)
WBls:000009218.3016From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
20.0481From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009437.4911From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
41.9586From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000009718.845From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
22.2499From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
40.5481From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
56.9018From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
5.86791From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
695.142From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:0000662195.89From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
208.427From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:000066391.2257From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Last_reviewed11 Aug 2017 16:46:19WBPerson4055
Methodcurated