WormBase Tree Display for CDS: Bm1854
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| Bm1854 | Evidence | Curator_confirmed | WBPerson615 | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
| Structure | Source_exons | 1 | 379 | ||
| 1155 | 1291 | ||||
| 1546 | 1647 | ||||
| 2961 | 3083 | ||||
| 3222 | 3308 | ||||
| 3546 | 3812 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A0H5SB38 | |
| UniProt | UniProtAcc | A0A0H5SB38 | |||
| AlphaFold | entry | A0A0H5SB38 | |||
| Protein_id | Bm_v4_ChrX_scaffold_001 | CRZ25762 | 1 | ||
| DB_remark | BMA-UNC-30 protein; contains similarity to Pfam domain PF00046 (Homeodomain); contains similarity to Interpro domains IPR001356 (Homeobox domain), IPR009057 (Homeobox-like domain superfamily) | ||||
| Origin | From_laboratory | ELG | |||
| Species | Brugia malayi | ||||
| Properties | Coding | CDS | |||
| CDS_predicted_by | RATT | ||||
| Prediction_status | Confirmed | ||||
| Visible | Gene | WBGene00222115 | |||
| Corresponding_transcript | Bm1854.1 | ||||
| Corresponding_protein | BM43328 | ||||
| Matching_cDNA | brugia_GG210|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||
| brugia_GG210|c0_g1_i2 | Inferred_automatically | transcript_builder.pl | |||
| RNASeq_FPKM (10) | |||||
| Remark | [20121017 js] this gene is based on RNASeq data and BLASTX alignments | Protein_id_evidence | TR:E1FIK5 | ||
| [131112 pad] Renamed from Bm1854c as this is a single Isoform locus. | Curator_confirmed | WBPerson1983 | |||
| Method | curated |
