WormBase Schema for Model: Sequence
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?Sequence | DNA | UNIQUE | ?DNA | UNIQUE | Int | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | UNIQUE (3) | |||||||||
S_child | Gene_child | ?Gene | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||
CDS_child | ?CDS | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Transcript | ?Transcript | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Pseudogene | ?Pseudogene | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Transposon | ?Transposon | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Genomic_non_canonical | ?Sequence | XREF | Canonical_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Nongenomic | ?Sequence | XREF | Genomic_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
PCR_product | ?PCR_product | XREF | Canonical_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Operon | ?Operon | XREF | Canonical_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
AGP_fragment | ?Sequence | XREF | AGP_parent | Int | UNIQUE | Int | #SMap_info | ||||
Allele | ?Variation | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Oligo_set | ?Oligo_set | XREF | Canonical_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Feature_object | ?Feature | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Feature_data | ?Feature_data | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Homol_data | ?Homol_data | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||
Structure | From (2) | ||||||||||
Subsequence | ?Sequence | XREF | Source | UNIQUE | Int | UNIQUE | Int | ||||
Overlap_right | UNIQUE | ?Sequence | XREF | Overlap_left | UNIQUE | Int | |||||
Overlap_left | UNIQUE | ?Sequence | XREF | Overlap_right | |||||||
Gap_right | UNIQUE | Int | Text | ||||||||
Clone_left_end | ?Clone | XREF | Clone_left_end | UNIQUE | Int | ||||||
Clone_right_end | ?Clone | XREF | Clone_right_end | UNIQUE | Int | ||||||
Flipped | |||||||||||
DB_info | Database | ?Database | ?Database_field | ?Text | |||||||
Protein_id | ?Sequence | UNIQUE | Text | UNIQUE | Int | ||||||
Secondary_accession | ?Text | ||||||||||
DB_remark | ?Text | #Evidence | |||||||||
Keyword | ?Keyword | ||||||||||
DB_annotation | ?Database | UNIQUE | ?LongText | ||||||||
EMBL_dump_info | #EMBL_dump_info | ||||||||||
Origin (13) | |||||||||||
Visible | Title | UNIQUE | ?Text | ||||||||
Matching_CDS | ?CDS | XREF | Matching_cDNA | #Evidence | |||||||
Matching_transcript | ?Transcript | XREF | Matching_cDNA | #Evidence | |||||||
Matching_pseudogene | ?Pseudogene | XREF | Matching_cDNA | #Evidence | |||||||
Clone | ?Clone | XREF | Sequence | ||||||||
Clone_end_seq_read | ?Clone | XREF | End_sequence | ||||||||
GO_term | ?GO_term | XREF | Sequence | ?GO_code | #Evidence | ||||||
Gene | ?Gene | XREF | Other_sequence | ||||||||
Paired_read | ?Sequence | XREF | Paired_read | ||||||||
Reference | ?Paper | XREF | Sequence | ||||||||
Expr_pattern | ?Expr_pattern | XREF | Sequence | ||||||||
Interaction | ?Interaction | ||||||||||
RNAi | ?RNAi | XREF | Sequence | ||||||||
Confidential_remark | ?Text | ||||||||||
Remark | ?Text | #Evidence | |||||||||
Properties (12) | |||||||||||
Splices | Confirmed_intron | Int | Int | #Splice_confirmation | |||||||
Predicted_5 | ?Method | Int | Int | UNIQUE | Float | ||||||
Predicted_3 | ?Method | Int | Int | UNIQUE | Float | ||||||
Cluster_information | Contains_reads | ?Sequence | XREF | Contained_in_cluster | |||||||
Contained_in_cluster | ?Sequence | XREF | Contains_reads | ||||||||
Map | ?Map | XREF | Sequence | #Map_position | |||||||
Interpolated_map_position | UNIQUE | ?Map | UNIQUE | Float | |||||||
Oligo | ?Oligo | XREF | In_sequence | Int | UNIQUE | Int | ?Method | ||||
Defines_feature | ?Feature | XREF | Defined_by_sequence | #Evidence | |||||||
Assembly_tags | Text | Int | Int | Text | |||||||
Homol (4) | |||||||||||
Method | UNIQUE | ?Method |