WormBase Schema for Model: Sequence
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?Sequence | DNA | UNIQUE | ?DNA | UNIQUE | Int | |||
---|---|---|---|---|---|---|---|---|
SMap | S_parent | UNIQUE | Canonical_parent | UNIQUE | ?Sequence | XREF | Genomic_non_canonical | |
Genomic_parent | UNIQUE | ?Sequence | XREF | Nongenomic | ||||
AGP_parent | UNIQUE | ?Sequence | XREF | AGP_fragment | ||||
S_child (15) | ||||||||
Structure (8) | ||||||||
DB_info (7) | ||||||||
Origin | From_database | UNIQUE | ?Database | UNIQUE | Int | |||
From_author | ?Author | XREF | Sequence | |||||
From_laboratory | UNIQUE | ?Laboratory | ||||||
Genetic_code | UNIQUE | ?Genetic_code | ||||||
Date | DateType | Text | ||||||
Date_directory | UNIQUE | Text | ||||||
Life_stage | UNIQUE | ?Life_stage | ||||||
Species | UNIQUE | ?Species | ||||||
Library | UNIQUE | ?Library | ||||||
Strain | UNIQUE | ?Strain | ||||||
Anatomy_term | ?Anatomy_term | |||||||
Analysis | UNIQUE | ?Analysis | ||||||
Read_coverage | UNIQUE | Float | ||||||
Visible | Title | UNIQUE | ?Text | |||||
Matching_CDS | ?CDS | XREF | Matching_cDNA | #Evidence | ||||
Matching_transcript | ?Transcript | XREF | Matching_cDNA | #Evidence | ||||
Matching_pseudogene | ?Pseudogene | XREF | Matching_cDNA | #Evidence | ||||
Clone | ?Clone | XREF | Sequence | |||||
Clone_end_seq_read | ?Clone | XREF | End_sequence | |||||
GO_term | ?GO_term | XREF | Sequence | ?GO_code | #Evidence | |||
Gene | ?Gene | XREF | Other_sequence | |||||
Paired_read | ?Sequence | XREF | Paired_read | |||||
Reference | ?Paper | XREF | Sequence | |||||
Expr_pattern | ?Expr_pattern | XREF | Sequence | |||||
Interaction | ?Interaction | |||||||
RNAi | ?RNAi | XREF | Sequence | |||||
Confidential_remark | ?Text | |||||||
Remark | ?Text | #Evidence | ||||||
Properties (12) | ||||||||
Splices | Confirmed_intron | Int | Int | #Splice_confirmation | ||||
Predicted_5 | ?Method | Int | Int | UNIQUE | Float | |||
Predicted_3 | ?Method | Int | Int | UNIQUE | Float | |||
Cluster_information | Contains_reads | ?Sequence | XREF | Contained_in_cluster | ||||
Contained_in_cluster | ?Sequence | XREF | Contains_reads | |||||
Map | ?Map | XREF | Sequence | #Map_position | ||||
Interpolated_map_position | UNIQUE | ?Map | UNIQUE | Float | ||||
Oligo | ?Oligo | XREF | In_sequence | Int | UNIQUE | Int | ?Method | |
Defines_feature | ?Feature | XREF | Defined_by_sequence | #Evidence | ||||
Assembly_tags | Text | Int | Int | Text | ||||
Homol (4) | ||||||||
Method | UNIQUE | ?Method |