WormBase Schema for Model: Sequence
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?Sequence | DNA | UNIQUE | ?DNA | UNIQUE | Int | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | UNIQUE | Canonical_parent | UNIQUE | ?Sequence | XREF | Genomic_non_canonical | |||||||
Genomic_parent | UNIQUE | ?Sequence | XREF | Nongenomic | ||||||||||
AGP_parent | UNIQUE | ?Sequence | XREF | AGP_fragment | ||||||||||
S_child | Gene_child | ?Gene | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | |||||
CDS_child | ?CDS | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Transcript | ?Transcript | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Pseudogene | ?Pseudogene | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Transposon | ?Transposon | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Genomic_non_canonical | ?Sequence | XREF | Canonical_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Nongenomic | ?Sequence | XREF | Genomic_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
PCR_product | ?PCR_product | XREF | Canonical_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Operon | ?Operon | XREF | Canonical_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
AGP_fragment | ?Sequence | XREF | AGP_parent | Int | UNIQUE | Int | #SMap_info | |||||||
Allele | ?Variation | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Oligo_set | ?Oligo_set | XREF | Canonical_parent | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Feature_object | ?Feature | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Feature_data | ?Feature_data | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Homol_data | ?Homol_data | XREF | Sequence | UNIQUE | Int | UNIQUE | Int | #SMap_info | ||||||
Structure (8) | ||||||||||||||
DB_info (7) | ||||||||||||||
Origin | From_database | UNIQUE | ?Database | UNIQUE | Int | |||||||||
From_author | ?Author | XREF | Sequence | |||||||||||
From_laboratory | UNIQUE | ?Laboratory | ||||||||||||
Genetic_code | UNIQUE | ?Genetic_code | ||||||||||||
Date | DateType | Text | ||||||||||||
Date_directory | UNIQUE | Text | ||||||||||||
Life_stage | UNIQUE | ?Life_stage | ||||||||||||
Species | UNIQUE | ?Species | ||||||||||||
Library | UNIQUE | ?Library | ||||||||||||
Strain | UNIQUE | ?Strain | ||||||||||||
Anatomy_term | ?Anatomy_term | |||||||||||||
Analysis | UNIQUE | ?Analysis | ||||||||||||
Read_coverage | UNIQUE | Float | ||||||||||||
Visible (15) | ||||||||||||||
Properties (12) | ||||||||||||||
Splices | Confirmed_intron | Int | Int | #Splice_confirmation | ||||||||||
Predicted_5 | ?Method | Int | Int | UNIQUE | Float | |||||||||
Predicted_3 | ?Method | Int | Int | UNIQUE | Float | |||||||||
Cluster_information (2) | ||||||||||||||
Map | ?Map | XREF | Sequence | #Map_position | ||||||||||
Interpolated_map_position | UNIQUE | ?Map | UNIQUE | Float | ||||||||||
Oligo | ?Oligo | XREF | In_sequence | Int | UNIQUE | Int | ?Method | |||||||
Defines_feature | ?Feature | XREF | Defined_by_sequence | #Evidence | ||||||||||
Assembly_tags | Text | Int | Int | Text | ||||||||||
Homol | DNA_homol | ?Sequence | XREF | DNA_homol | ?Method | Float | Int | UNIQUE | Int | Int | UNIQUE | Int | #Homol_info | |
Pep_homol | ?Protein | XREF | DNA_homol | ?Method | Float | Int | UNIQUE | Int | Int | UNIQUE | Int | #Homol_info | ||
Motif_homol | ?Motif | XREF | DNA_homol | ?Method | Float | Int | UNIQUE | Int | Int | UNIQUE | Int | #Homol_info | ||
Homol_homol | ?Homol_data | XREF | DNA_homol | ?Method | Float | Int | UNIQUE | Int | Int | UNIQUE | Int | #Homol_info | ||
Method | UNIQUE | ?Method |