WormBase Schema for Model: Interaction
expand all nodes | collapse all nodes
?Interaction | Interaction_type | Physical | UNIQUE | ProteinProtein | |
---|---|---|---|---|---|
ProteinDNA | |||||
ProteinRNA | |||||
Predicted | |||||
Regulatory | Change_of_localization | ||||
Change_of_expression_level | |||||
Genetic (33) | |||||
GI_module_one | A_phenotypic | ||||
Mono_phenotypic | |||||
Cis_phenotypic | |||||
Iso_phenotypic | |||||
Trans_phenotypic | |||||
GI_module_two | Enhancing | ||||
Suppressing | |||||
All_suppressing | |||||
Super_suppressing | |||||
Sub_suppressing | |||||
Inter_suppressing | |||||
Semi_suppressing | |||||
Co_suppressing | |||||
Masking | |||||
GI_module_three | Neutral | ||||
Non_neutral | |||||
Positive | |||||
Negative | |||||
Converging | |||||
Diverging | |||||
Interactor (10) | |||||
Interaction_summary | ?Text | #Evidence | |||
Detection_method | Affinity_capture_luminescence | ||||
Affinity_capture_MS | |||||
Affinity_capture_RNA | |||||
Affinity_capture_Western | |||||
Chromatin_immunoprecipitation | |||||
Cofractionation | |||||
Colocalization | |||||
Construct | |||||
Copurification | |||||
DNase_I_footprinting | |||||
Fluorescence_resonance_energy_transfer | |||||
Protein_fragment_complementation_assay | |||||
Yeast_two_hybrid | |||||
Biochemical_activity | |||||
Cocrystal_structure | |||||
Far_western | |||||
Protein_peptide | |||||
Protein_RNA | |||||
Reconstituted_complex | |||||
Electrophoretic_mobility_shift_assay | |||||
Yeast_one_hybrid | |||||
Directed_yeast_one_hybrid | |||||
Antibody | |||||
Reporter_gene | ?Text | ||||
Transgene | |||||
In_situ | Text | ||||
Northern | Text | ||||
Western | Text | ||||
RT_PCR | Text | ||||
Other_method | ?Text | ||||
Library_info | Library_screened | Text | Int | ||
Origin (2) | |||||
Regulation_level | Transcriptional | ||||
Post_transcriptional | |||||
Post_translational | |||||
Regulation_result | Positive_regulate | #GR_condition | |||
Negative_regulate | #GR_condition | ||||
Does_not_regulate | #GR_condition | ||||
Confidence | Description | Text | |||
P_value | UNIQUE | Float | |||
Log_likelihood_score | UNIQUE | Float | |||
Throughput | UNIQUE | High_throughput | |||
Low_throughput | |||||
Interaction_RNAi | ?RNAi | XREF | Interaction | ||
Interaction_phenotype | ?Phenotype | XREF | Interaction | ||
Unaffiliated_variation | ?Variation | ||||
Unaffiliated_transgene | ?Transgene | ||||
Unaffiliated_antibody | ?Antibody | ||||
Unaffiliated_expr_pattern | ?Expr_pattern | ||||
Unaffiliated_construct | ?Construct | ||||
WBProcess | ?WBProcess | XREF | Interaction | ||
DB_info | Database | ?Database | ?Database_field | ?Text | |
Paper | ?Paper | XREF | Interaction | ||
Antibody_remark | ?Text | ||||
Historical_gene | ?Gene | Text | |||
Remark | ?Text | #Evidence |