Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar02157916

expand all nodes | collapse all nodes | view schema

Name Class

WBVar02157916EvidencePerson_evidenceWBPerson38015
NamePublic_nameraj181
Other_nameF23H12.4a.1:c.*134_*136delinsATCCCTCAAACCTCACCAAACC
HGVSgCHROMOSOME_V:g.12354214_12354216delinsATCCCTCAAACCTCACCAAACC
Sequence_detailsSMapS_parentSequenceF23H12
Flanking_sequencesctttacttctttcttctcacagtccaaacctcatcatctcgttgttgtgtatagtcgcgt
Mapping_targetF23H12
Type_of_mutationInsertionATCCCTCAAACCTCACCAAACC
DeletionTCA
SeqStatusSequenced
OriginSpeciesCaenorhabditis elegans
Production_methodCRISPR_Cas9
StatusLive
AffectsGeneWBGene00005018
TranscriptF23H12.4a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF23H12.4a.1:c.*134_*136delinsATCCCTCAAACCTCACCAAACC
cDNA_position1316-1318
Exon_number5/5
Possibly_affectsWBGene00005018Paper_evidenceWBPaper00061301
RemarkCGC_name sqt-3
DescriptionPhenotype_not_observedWBPhenotype:0000501Paper_evidenceWBPaper00061301
Curator_confirmedWBPerson38015
PenetranceCompletePaper_evidenceWBPaper00061301
Curator_confirmedWBPerson38015
ReferenceWBPaper00061301
Remarkrevertant of sqt-3(raj131), isolated using CRISPR-Cas9 parallel genetics approach (Froehlich & Uyar et al., 2021)Paper_evidenceWBPaper00061301
Person_evidenceWBPerson38015
Curator_confirmedWBPerson51134
alt_det = ATCCCTCAAACCTCACCAAACCPaper_evidenceWBPaper00061301
Person_evidenceWBPerson38015
Curator_confirmedWBPerson51134
Variation information submitted by WBPerson38015 on 2022-06-28_09:57:37 via the Allele submission form.Curator_confirmedWBPerson51134
[2022-09-29T19:58:02.384Z WBPerson2987] New Variation: WBPaper00061301; Table S3 allele of sqt-3Curator_confirmedWBPerson2987
MethodEngineered_allele