WormBase Tree Display for Variation: WBVar02156404

WBVar02156404 Name: Public_name: gk5552
    HGVSg: CHROMOSOME_III:g.4862038_4863358del
  Sequence_details: SMap: S_parent: Sequence: C35D10
    Flanking_sequences: AAGAAAACCGAAAAATGTTCTCGTTGCTCC ATTGTTTATACGCGTGTTTCTCTCCACTCT
    Mapping_target: CHROMOSOME_III
    Type_of_mutation: Deletion
    SeqStatus: Pending_curation
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00051177
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00016442
    Transcript: C35D10.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-819
        Intron_number: 2-5/6
        Exon_number: 1-7/7
  Isolation: Mutagen: CRISPR_Cas9
  Remark: Variation accession generated for Mark Edgley for a set of gk CRISPR alleles.
    Deletion_verification Flanking sequences and deletion extents inferred from design of CRISPR deletion/selection cassette insertion HDR event. QC-PCR assays indicate that the event is perfect, but it was not sequenced.
  Method: Allele