WormBase Tree Display for Variation: WBVar02154007

WBVar02154007 Evidence: Curator_confirmed: WBPerson1983
  Name: Public_name: ve559
    HGVSg: CHROMOSOME_V:g.5111630_5113885del
  Sequence_details: SMap: S_parent: Sequence: C04F5
    Flanking_sequences: ccgagtccccgtgagctctcgaatcccgta atgggttactgtagcgcttgtatcgattta
    Mapping_target: C04F5
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Engineered_allele
    Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00047465
    Laboratory: RG
    Production_method: CRISPR_Cas9
    Status: Live
  Affects: Gene: WBGene00015450
    Transcript: C04F5.8.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-989
        CDS_position: ?-988
        Protein_position: ?-330
        Intron_number: 2-4/5
        Exon_number: 1-5/6
  Remark: Batch created from Strain genotype data Curator_confirmed: WBPerson1983
    Whole gene deletions made by the Rougvie, Moerman, Hutter and Sternberg labs that replace the coding sequence with a [LoxP + myo-2p::GFP::unc-54 3Prime UTR + rps-27p::neoR::unc-54 3Prime UTR + LoxP] cassette.
    Allele Description:C04F5.8(ve559[loxP + myo-2p::GFP::unc-54 3' UTR + rps-27p::neoR::unc-54 3' UTR + loxP]) V.
  Method: Engineered_allele