WormBase Tree Display for Variation: WBVar02153734

WBVar02153734 Name: Public_name: gk5480
    HGVSg: CHROMOSOME_I:g.13309660_13310568del
  Sequence_details: SMap: S_parent: Sequence: T04D3
    Flanking_sequences: GACGAAAAATCCAAATACATAACGAGACCC GATGGACTCAATTTCGACTATTTCCTGTTC
    Mapping_target: CHROMOSOME_I
    Type_of_mutation: Deletion
    SeqStatus: Pending_curation
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00047661
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00014503
      WBGene00011435
    Transcript: T04D3.t4 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      T04D3.8.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-288
        CDS_position: ?-268
        Protein_position: ?-90
        Intron_number: 2-3/4
        Exon_number: 1-4/5
  Isolation: Mutagen: CRISPR_Cas9
  Genetics: Interpolated_map_position: I 17.6189
  Remark: Batch created from Strain genotype data Curator_confirmed: WBPerson1983
    Deletion_verification Flanking sequences and deletion extents inferred from design of CRISPR deletion/selection cassette insertion HDR event. QC-PCR assays indicate that the event is imperfect, but it was not sequenced.
  Method: Deletion_allele