WormBase Tree Display for Variation: WBVar02152049

WBVar02152049 Name: Public_name: tm11733
    Other_name: Y60A3A.1.1:c.409-218_532delinsT
    HGVSg: CHROMOSOME_V:g.20001179_20001520delinsA
  Sequence_details: SMap: S_parent: Sequence: Y60A3A
    Flanking_sequences: cgggagccatgtacattggggatccgcaga aaggcttagacttggggcttagggcttagg
    Mapping_target: Y60A3A
    Source_location: 7 CHROMOSOME_V 20001178 20001521 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: A
      Deletion
    PCR_product: tm11733_external
      tm11733_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 11733
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006786
    Transcript: Y60A3A.1.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y60A3A.1.1:c.409-218_532delinsT
        cDNA_position: ?-597
        CDS_position: ?-532
        Protein_position: ?-178
        Intron_number: 4/10
        Exon_number: 5/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Remark: 97232/97233-A-97574/97575 (342 bp deletion + 1 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele