WormBase Tree Display for Variation: WBVar02151978

WBVar02151978 Name: Public_name: tm11654
    Other_name: C02B10.3.1:c.351-73_475delinsTT
    HGVSg: CHROMOSOME_IV:g.5094237_5094434delinsAA
  Sequence_details: SMap: S_parent: Sequence: C02B10
    Flanking_sequences: tgttacgataacggtgttgttgagttgaaa atgccttgtaaatactcttgcaatagtata
    Mapping_target: C02B10
    Source_location: 7 CHROMOSOME_IV 5094236 5094435 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: AA
      Deletion
    PCR_product: tm11654_external
      tm11654_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 11654
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00167414
      WBGene00015328
    Transcript: C02B10.38
      C02B10.3.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C02B10.3.1:c.351-73_475delinsTT
        cDNA_position: ?-484
        CDS_position: ?-475
        Protein_position: ?-159
        Intron_number: 4/6
        Exon_number: 5/7
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Remark: 23404/23405-AA-23602/23603 (198 bp deletion + 2 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele