WormBase Tree Display for Variation: WBVar02151518

WBVar02151518 Name: Public_name: tm11174
  Sequence_details: SMap: S_parent: Sequence: CHROMOSOME_III
    Flanking_sequences: tgcacattgtttcgttgtaacaccagctggtggtcccgaaacaatccaatttgaatcaagagcacgatgaagaaatcgaacccagttttctcga acagttcaatgtcaatccacaggatgctct
    Mapping_target: CHROMOSOME_III
    Source_location: 7 CHROMOSOME_III 4041540 4071918 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm11174_external
      tm11174_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 11174
    NBP_allele
    Status: Live
  Affects: Gene (11)
    Transcript: E03A3.6a.1
      E03A3.11
      E03A3.4.1
      E03A3.12
      E03A3.9
      E03A3.6b.1
      E03A3.2.1
      E03A3.3.1
    Pseudogene: E03A3.10
      E03A3.1
      E03A3.5
      T02C12.4
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Remark: [T02C12]21942/21943-[E03A3]29662/29663 (30377 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
    Old Mapping_target T02C12 updated based on the VEP analysis pipeline to CHROMOSOME_III.
  Method: NBP_knockout_allele