WormBase Tree Display for Variation: WBVar02151326

WBVar02151326 Name: Public_name: tm10971
  Sequence_details: SMap: S_parent: Sequence: CHROMOSOME_I
    Flanking_sequences: attggttacaaaatccggctgtgcatcttc aaagtgtggaaggaagttcgaatgtgaatacaaaaacatatagagtcattgtatgatgtgaacttatattattagcaattatatcggcgcccacattgaaaccaccaattagtgggaaaaaatagaatgcggggcatatgaagatcatttcgatttctgcgatgaagctgacaagctgaaaataaaaaaaaacattctggggtagacatataggcaggcagacgtgtctacctaccaaaaagcgactcgtaagatgtcgggcgcggtaccaattttctaaaaacctagttttcaagtacctggttaccaactgttgccctgatctgatctactacgatcttaatttcacctgtctgcttgccttcctacatgcctaccttgcgccggccagagtcttgatatatcttctgtctatcaccctacctacaagcctaccttattcattaagcttgcctacatgatgctttttttttcagattttggacataacttgtgtacccgacctggattttgcctaagggcctatcgcccacatttgtgtcttactgcctctcttccaagattatactttactgttttttgtgcctacctctgtgcctcatcattgcctacctaggtgcctactcacgttcgaatctcacctgtaaatagcataggcaatatttgtagccttgcattttgggagattgaaaccaaactaaatagaaaccgatcaaatttatgggaattgaaattccgccaataatatgtaatgttaataggtaatatgtaggtatagatgatgggcatggtggacctgcaggcatttctgtaaaattgattaaaggttttgggaatttttagctaacaataagggagtgcagaggagtaagaaaaatgtaagtaaaaatcgatttcaaaataataaaacgggatattcttacaattagttattctgtttttcttgaacataactatacatcagaaaaaattctagaaaattgggagaaaagctcaaaaatcgaagcaattgaaggtatcatcaactcaacccgtaaattatgtcagatctctgaaaaaaagactaagtcttgatttttaaatttctgtctattgtgacgattttggatgtgtcgggaagtgttcaaaaactcattgtagtttgttgtctctgacgtcacctcatggtgcatccgtatggtgcatccgacataaaatagcaaacataaaatggcaattaaggatgttgacaaaagtttggctccattttctcagaaaagttgcgcacaaaattcgagatttttagcagatgttttatttattttttcggagaaaatagttttaaggtcaaattatcaatggttgggcacgaaaactggaacaaacttcatcaaaagtttcaaattttccgttcaactttttcgttattacaccaagaacaatttagaaattaaattatatttattccaataaattgctacgttcagacacattgatttatcgagctttgattctacccggaaatgctctgaaagtgtcatcattgagttaaaatccctatatctcaaaaactactggttttataaaaaagttgataaacattaaaatgtagagtagaaaatttggagtattttcatagttaaaaattttctgatagcattcatggtttgtgagataaatagggtttgaagaaggtccctaaaaaggaagcccaaaaatgtcggccgcaagcctcaccggattttctgcgtttccccacaagtatggatttaaagtttaaatgtgaaaaaattgtgaatacacaaactgaaaactaaaaattgaaattgaaaaagaaaatcagatgcgacgaaatgcgttctggcttgtgaagcctgaaggttttttcctgatttttgagtggaaagtgcgtcaaatctagaaatgtcaactgaacgtctatgaaaggaagaacaaggattattcatgagcttaggcagtttttcgatatcaaaaatgaaaaactttttcggtatgtacttgggtttgaaaatctgaaatatgtacaaccaataaaacttacggaaagacagcttctccgcgctctctccgctaacaagtcggtcaattttcaaattttaactaattataggtcattttttgagccgccgtgacatttttggaaaagttttcaagaggtttagtcatgaaatttgatattttcaaattaaaactatcgactacactaaaaaaaagtacgtcaaagctgaaaaaaatagctttcacatcgaaatacgaatatcatagttcaaactaatatttatatggatatatttttcttgaatttccggcgaaaattgaatcatggtcagaaagcgatcgttcaatctaaatcaatttactttttctccactttattaacttgtcagaaatcatgaaaacaagccaatttgaatgatatgcggggggaacatgcgaacgcagagagagaattgaattgggctaggagctcaggaagttggagcaggaaatgttgcaaaactcggaaattcaattattaaacatcagctgccgacaactcacgggttccgccgccctttgtgatttttttgatgagtagcggaacccgcgt
    Mapping_target: CHROMOSOME_I
    Source_location: 7 CHROMOSOME_I 12093355 12135660 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm10971_external
      tm10971_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 10971
    NBP_allele
    Status: Live
  Affects: Gene (17)
    Transcript (16)
    Pseudogene: M01G12.3
      M01G12.8
      M01G12.11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Remark: [Y47H10A]21791/21792-[M01G12]32674/32675 (42304 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
    Old Mapping_target Y47H10A updated based on the VEP analysis pipeline to CHROMOSOME_I.
  Method: NBP_knockout_allele