WormBase Tree Display for Variation: WBVar02148262

WBVar02148262 Name: Public_name: tm10513
    Other_name: F16H6.4b.1:c.546-148_598del
      F16H6.4a.1:c.546-148_598del
    HGVSg: CHROMOSOME_V:g.18200522_18200722del
  Sequence_details: SMap: S_parent: Sequence: F16H6
    Flanking_sequences: caaaaatcgacagttttgagtcattttgaa atttgttcattcgaattccgcctttggagt
    Mapping_target: F16H6
    Source_location: 7 CHROMOSOME_V 18200521 18200723 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm10513_external
      tm10513_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 10513
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00008894
    Transcript: F16H6.4a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F16H6.4a.1:c.546-148_598del
        cDNA_position: ?-598
        CDS_position: ?-598
        Protein_position: ?-200
        Intron_number: 4/10
        Exon_number: 5/11
      F16H6.4b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F16H6.4b.1:c.546-148_598del
        cDNA_position: ?-598
        CDS_position: ?-598
        Protein_position: ?-200
        Intron_number: 4/11
        Exon_number: 5/12
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 10858/10859-11059/11060 (201 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele