WormBase Tree Display for Variation: WBVar02147825

WBVar02147825 Name: Public_name: tm7764
    Other_name: F12B6.1b.1:c.5250_5483+28del
      F12B6.1a.1:c.5361_5594+28del
    HGVSg: CHROMOSOME_I:g.2258487_2258748del
  Sequence_details: SMap: S_parent: Sequence: F12B6
    Flanking_sequences: cttcaaataatgtggtaaattataaatcct tgtctctccttcaccacatcctcatcgtcg
    Mapping_target: F12B6
    Source_location: 7 CHROMOSOME_I 2258486 2258749 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm7764_external
      tm7764_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 7764
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00000020
    Transcript: F12B6.1a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F12B6.1a.1:c.5361_5594+28del
        cDNA_position: 5361-?
        CDS_position: 5361-?
        Protein_position: 1787-?
        Intron_number: 30/33
        Exon_number: 30/34
      F12B6.1b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F12B6.1b.1:c.5250_5483+28del
        cDNA_position: 5250-?
        CDS_position: 5250-?
        Protein_position: 1750-?
        Intron_number: 30/32
        Exon_number: 30/33
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 18961/18962-19223/19224 (262 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele