WormBase Tree Display for Variation: WBVar02145244

WBVar02145244 Name: Public_name: tm8080
    Other_name: ZK896.7.1:c.682-39_723del
    HGVSg: CHROMOSOME_IV:g.12867640_12867772del
  Sequence_details: SMap: S_parent: Sequence: ZK896
    Flanking_sequences: attaaattatcaattattgataacaagaac gatgctccgttcttgacaagagagaatcaa
    Mapping_target: ZK896
    Source_location: 7 CHROMOSOME_IV 12867639 12867773 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm8080_external
      tm8080_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 8080
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00014138
    Transcript: ZK896.7.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: ZK896.7.1:c.682-39_723del
        cDNA_position: ?-772
        CDS_position: ?-723
        Protein_position: ?-241
        Intron_number: 4-5/8
        Exon_number: 5-6/9
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 15768/15769-15901/15902 (133 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele