WormBase Tree Display for Variation: WBVar02144435
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WBVar02144435 | Evidence | Paper_evidence | WBPaper00046810 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | jj67 | |||||
Other_name | CE29046:p.Trp197Ter | ||||||
CE01953:p.Trp197Ter | |||||||
CE54061:p.Trp197Ter | |||||||
F48E8.1b.1:c.591G>A | |||||||
F48E8.1a.1:c.591G>A | |||||||
F48E8.1c.1:c.591G>A | |||||||
HGVSg | CHROMOSOME_III:g.5476442G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F48E8 | |||
Flanking_sequences | ctcccgttgccgtgacgttcagggtgtctg | ggacgtggacatcgtaacgtattcgtctgt | |||||
Mapping_target | F48E8 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00046810 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | LW | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00003055 | |||||
Transcript | F48E8.1b.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F48E8.1b.1:c.591G>A | ||||||
HGVSp | CE29046:p.Trp197Ter | ||||||
cDNA_position | 636 | ||||||
CDS_position | 591 | ||||||
Protein_position | 197 | ||||||
Exon_number | 6/8 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
F48E8.1c.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | F48E8.1c.1:c.591G>A | ||||||
HGVSp | CE54061:p.Trp197Ter | ||||||
cDNA_position | 591 | ||||||
CDS_position | 591 | ||||||
Protein_position | 197 | ||||||
Exon_number | 5/6 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
F48E8.1a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | F48E8.1a.1:c.591G>A | ||||||
HGVSp | CE01953:p.Trp197Ter | ||||||
cDNA_position | 634 | ||||||
CDS_position | 591 | ||||||
Protein_position | 197 | ||||||
Exon_number | 6/8 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
Interactor | WBInteraction000525307 | ||||||
Genetics | Interpolated_map_position | III | -1.62775 | ||||
Reference | WBPaper00046810 | ||||||
Method | Substitution_allele |