WormBase Tree Display for Variation: WBVar02143875

WBVar02143875 Name: Public_name: tm6978
    Other_name: T07D3.6:n.358_949delinsAAATATGTAGGG
    HGVSg: CHROMOSOME_II:g.881074_882030delinsAAATATGTAGGG
  Sequence_details: SMap: S_parent: Sequence: T07D3
    Flanking_sequences: ttttcctctttcttgttttaatattatttc gtgctcaatcattccgcacactaccgacat
    Mapping_target: T07D3
    Source_location: 7 CHROMOSOME_II 881073 882031 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: AAATATGTAGKG
      Deletion
    PCR_product: tm6978_external
      tm6978_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6978
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00020309
    Pseudogene: T07D3.6 VEP_consequence: splice_acceptor_variant,splice_donor_variant,non_coding_transcript_exon_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T07D3.6:n.358_949delinsAAATATGTAGGG
        cDNA_position: 358-949
        Intron_number: 3-6/9
        Exon_number: 3-7/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 8611/8612-AAATATGTAGKG-9568/9569 (957 bp deletion + 12 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele