WormBase Tree Display for Variation: WBVar02139942

WBVar02139942 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h12833
    Other_name: T06H11.1f.1:c.413-5054C>T
      T06H11.1b.1:c.263-5054C>T
      T06H11.1d.1:c.293-5054C>T
      T06H11.1c.1:c.148+2953C>T
    HGVSg: CHROMOSOME_X:g.10114385G>A
  Sequence_details: SMap: S_parent: Sequence: T06H11
    Flanking_sequences: GATACAAAAATACAGTCATTCATAAGTGTTCTAAATTTTA AGACAGGAACACTTGAATGGATGTTTCAATATTATGAGTG
    Mapping_target: CHROMOSOME_X
    Source_location: 200 CHROMOSOME_X 10114318 10114318
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023862
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00006792
    Transcript: T06H11.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1b.1:c.263-5054C>T
        Intron_number: 3/12
      T06H11.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1f.1:c.413-5054C>T
        Intron_number: 4/14
      T06H11.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1d.1:c.293-5054C>T
        Intron_number: 1/11
      T06H11.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T06H11.1c.1:c.148+2953C>T
        Intron_number: 2/13
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose