WormBase Tree Display for Variation: WBVar02137303
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WBVar02137303 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h12651 | ||||
Other_name | C14C10.5a.1:c.4378C>T | |||||
C14C10.5b.1:c.4330C>T | ||||||
CE05284:p.Pro1460Ser | ||||||
CE48360:p.Pro1444Ser | ||||||
HGVSg | CHROMOSOME_V:g.12605386C>T | |||||
Sequence_details | SMap | S_parent | Sequence | C14C10 | ||
Flanking_sequences | GAGGTACGAAAAGCAGAGAAAAATGTGGAATTGGCTCGAC | CGATGCTCACGAAAACATTTGAACTGATGAAAGAAGACGG | ||||
Mapping_target | CHROMOSOME_V | |||||
Source_location | 200 | CHROMOSOME_V | 12605365 | 12605365 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023858 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00007588 | ||||
Transcript | C14C10.5b.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
HGVSc | C14C10.5b.1:c.4330C>T | |||||
HGVSp | CE48360:p.Pro1444Ser | |||||
cDNA_position | 4424 | |||||
CDS_position | 4330 | |||||
Protein_position | 1444 | |||||
Exon_number | 7/11 | |||||
Codon_change | Ccg/Tcg | |||||
Amino_acid_change | P/S | |||||
C14C10.5a.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
HGVSc | C14C10.5a.1:c.4378C>T | |||||
HGVSp | CE05284:p.Pro1460Ser | |||||
cDNA_position | 4472 | |||||
CDS_position | 4378 | |||||
Protein_position | 1460 | |||||
Exon_number | 6/10 | |||||
Codon_change | Ccg/Tcg | |||||
Amino_acid_change | P/S | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |