WormBase Tree Display for Variation: WBVar02136519

WBVar02136519 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h8363
    Other_name: ZK1055.6b.1:c.802C>T
      CE29154:p.Gln268Ter
      ZK1055.6a.1:c.703C>T
      ZK1055.6a.2:c.703C>T
      CE18475:p.Gln235Ter
    HGVSg: CHROMOSOME_V:g.6600959G>A
  Sequence_details: SMap: S_parent: Sequence: ZK1055
    Flanking_sequences: AGAACACCTAGTTCAGGAATCTGTCCTCCGAGACTAGGTT AGCAGTCGACAAAACAGCTGGAAATTCGTTCCAGTCTTCT
    Mapping_target: CHROMOSOME_V
    Source_location: 200 CHROMOSOME_V 6600942 6600942
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023678
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00022847
    Transcript: ZK1055.6b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK1055.6b.1:c.802C>T
        HGVSp: CE29154:p.Gln268Ter
        cDNA_position: 802
        CDS_position: 802
        Protein_position: 268
        Exon_number: 4/6
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
      ZK1055.6a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK1055.6a.1:c.703C>T
        HGVSp: CE18475:p.Gln235Ter
        cDNA_position: 1424
        CDS_position: 703
        Protein_position: 235
        Exon_number: 4/6
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
      ZK1055.6a.2 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: ZK1055.6a.2:c.703C>T
        HGVSp: CE18475:p.Gln235Ter
        cDNA_position: 978
        CDS_position: 703
        Protein_position: 235
        Exon_number: 5/7
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose