WormBase Tree Display for Variation: WBVar02136112

WBVar02136112 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h4340
    Other_name: T27C4.4a.1:c.2527-182G>A
      T27C4.4b.1:c.2527-182G>A
      T27C4.4e.1:c.2122-182G>A
      T27C4.4b.2:c.2527-182G>A
      T27C4.4d.1:c.2527-182G>A
    HGVSg: CHROMOSOME_V:g.3709856G>A
  Sequence_details: SMap: S_parent: Sequence: T27C4
    Flanking_sequences: TATTTGACGCGCAAAATATCTCATAGCGAAAACTACTGTAATTCTTAAAATGACTACTGTAGCGCTTGTGTCGATTTACG GATTTCGATATGTTTTGTGTTAAAAATTTTTTTATCGATT
    Mapping_target: CHROMOSOME_V
    Source_location: 200 CHROMOSOME_V 3709843 3709843
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023795
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00003025
    Transcript: T27C4.4d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4d.1:c.2527-182G>A
        Intron_number: 6/8
      T27C4.4b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4b.2:c.2527-182G>A
        Intron_number: 6/8
      T27C4.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4a.1:c.2527-182G>A
        Intron_number: 6/9
      T27C4.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4e.1:c.2122-182G>A
        Intron_number: 3/4
      T27C4.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T27C4.4b.1:c.2527-182G>A
        Intron_number: 6/8
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose