WormBase Tree Display for Variation: WBVar02134216

WBVar02134216 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h14218
    Other_name: C55F2.1b.1:c.814+116G>A
      C55F2.1a.1:c.139+116G>A
      C55F2.1c.1:c.424+116G>A
      C55F2.1a.2:c.139+116G>A
    HGVSg: CHROMOSOME_IV:g.7893229G>A
  Sequence_details: SMap: S_parent: Sequence: C55F2
    Flanking_sequences: GCTGCTTATTGGCATGCAGTTCTGAACTTTGTATCATTCA AAAGTTAAATTTTTAGGCCAACCTTTCCACCATTAGTAAA
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 7893212 7893212
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023854
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00016957
    Transcript: C55F2.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C55F2.1a.2:c.139+116G>A
        Intron_number: 5/16
      C55F2.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C55F2.1b.1:c.814+116G>A
        Intron_number: 9/19
      C55F2.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C55F2.1a.1:c.139+116G>A
        Intron_number: 9/20
      C55F2.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C55F2.1c.1:c.424+116G>A
        Intron_number: 5/15
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose