WormBase Tree Display for Variation: WBVar02133060

WBVar02133060 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h5554
    Other_name: F45G2.2a.1:c.2296-2107G>A
      F45G2.2b.2:c.-240-2107G>A
    HGVSg: CHROMOSOME_III:g.13418078G>A
  Sequence_details: SMap: S_parent: Sequence: F45G2
    Flanking_sequences: TTCATCATGTCTGGAGGTTCTTCTACTTGCAAGCTTGTGA CGGAGGTGCTGATAAACTCATCTTCAAGTTCAAGTCATTC
    Mapping_target: CHROMOSOME_III
    Source_location: 200 CHROMOSOME_III 13417959 13417959
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023667
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00009730
    Transcript: F45G2.2b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F45G2.2b.2:c.-240-2107G>A
        Intron_number: 12/21
      F45G2.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F45G2.2a.1:c.2296-2107G>A
        Intron_number: 16/24
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose