WormBase Tree Display for Variation: WBVar02130776
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| WBVar02130776 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h7570 | ||||
| Other_name | F13D12.7b.2:c.*902C>T | |||||
| F13D12.7a.1:c.*902C>T | ||||||
| F13D12.7b.3:c.*902C>T | ||||||
| F13D12.7b.4:c.*902C>T | ||||||
| F13D12.7b.1:c.*902C>T | ||||||
| F13D12.7b.5:c.*902C>T | ||||||
| HGVSg | CHROMOSOME_II:g.11743077G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | F13D12 | ||
| Flanking_sequences | AATTTTGCGATCGGAAGAACTTACAAAATCACGGTGGTAG | AGAATTAAAAGAAATTAGAAAAAAAAACTTAGGGGGTTTT | ||||
| Mapping_target | CHROMOSOME_II | |||||
| Source_location | 200 | CHROMOSOME_II | 11742994 | 11742994 | ||
| Type_of_mutation | Substitution | G | A | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023700 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00001679 | ||||
| Transcript | F13D12.7b.5 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13D12.7b.5:c.*902C>T | |||||
| cDNA_position | 1429 | |||||
| Exon_number | 6/6 | |||||
| F13D12.7a.1 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13D12.7a.1:c.*902C>T | |||||
| cDNA_position | 1928 | |||||
| Exon_number | 11/11 | |||||
| F13D12.7b.4 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13D12.7b.4:c.*902C>T | |||||
| cDNA_position | 1581 | |||||
| Exon_number | 7/7 | |||||
| F13D12.7b.1 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13D12.7b.1:c.*902C>T | |||||
| cDNA_position | 2182 | |||||
| Exon_number | 12/12 | |||||
| F13D12.7b.2 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13D12.7b.2:c.*902C>T | |||||
| cDNA_position | 2096 | |||||
| Exon_number | 11/11 | |||||
| F13D12.7b.3 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F13D12.7b.3:c.*902C>T | |||||
| cDNA_position | 1869 | |||||
| Exon_number | 10/10 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
