WormBase Tree Display for Variation: WBVar02130231

WBVar02130231 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h15413
    Other_name: CE52024:p.Leu657=
      K02A2.3a.1:c.1971G>A
      K02A2.3b.1:c.2004G>A
      CE51971:p.Leu668=
    HGVSg: CHROMOSOME_II:g.7427901C>T
  Sequence_details: SMap: S_parent: Sequence: K02A2
    Flanking_sequences: TCCAATTCTTTGGATGTGGATCTTTGTCCTCGACTTTTAG AGGCTGTATTGTGCAGTTGTCAGAGCCAAACCTCTCATTC
    Mapping_target: CHROMOSOME_II
    Source_location: 200 CHROMOSOME_II 7427840 7427840
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023766
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00019289
    Transcript: K02A2.3a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: K02A2.3a.1:c.1971G>A
        HGVSp: CE52024:p.Leu657=
        cDNA_position: 1989
        CDS_position: 1971
        Protein_position: 657
        Exon_number: 11/17
        Codon_change: ctG/ctA
        Amino_acid_change: L
      K02A2.3b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: K02A2.3b.1:c.2004G>A
        HGVSp: CE51971:p.Leu668=
        cDNA_position: 2004
        CDS_position: 2004
        Protein_position: 668
        Exon_number: 11/16
        Codon_change: ctG/ctA
        Amino_acid_change: L
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose