WormBase Tree Display for Variation: WBVar02130104
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WBVar02130104 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h16472 | ||||
Other_name | K06A1.6c.1:c.680+196G>A | |||||
K06A1.6b.1:c.545+196G>A | ||||||
K06A1.6d.1:c.347+196G>A | ||||||
K06A1.6a.1:c.533+196G>A | ||||||
HGVSg | CHROMOSOME_II:g.6465332C>T | |||||
Sequence_details | SMap | S_parent | Sequence | T28D9 | ||
Flanking_sequences | GCAGCCCAGGACAATTTGAATTAAGATGAATGGTAGTTTA | CATTTGAATTGGGGTAGAAAACACAAATCTCTGATTGTTG | ||||
Mapping_target | CHROMOSOME_II | |||||
Source_location | 200 | CHROMOSOME_II | 6465283 | 6465283 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023756 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00019428 | ||||
Transcript | K06A1.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | K06A1.6a.1:c.533+196G>A | |||||
Intron_number | 5/15 | |||||
K06A1.6c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | K06A1.6c.1:c.680+196G>A | |||||
Intron_number | 6/16 | |||||
K06A1.6b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | K06A1.6b.1:c.545+196G>A | |||||
Intron_number | 5/15 | |||||
K06A1.6d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | K06A1.6d.1:c.347+196G>A | |||||
Intron_number | 2/11 | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |