WormBase Tree Display for Variation: WBVar02129835
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WBVar02129835 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h8460 | ||||
Other_name | CE54007:p.Leu449= | |||||
F10G7.10.2:c.1347C>T | ||||||
F10G7.10.1:c.1347C>T | ||||||
HGVSg | CHROMOSOME_II:g.4724082G>A | |||||
Sequence_details | SMap | S_parent | Sequence | F41C3 | ||
Flanking_sequences | GCACATTTTCGTTCAATTCTTTACACAGTGACGCCGAGGA | AGCATTTGAACAGTAACATGAACAGCTCGGCTACACGCAG | ||||
Mapping_target | CHROMOSOME_II | |||||
Source_location | 200 | CHROMOSOME_II | 4724070 | 4724070 | ||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023686 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00017373 | ||||
Transcript | F10G7.10.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | F10G7.10.1:c.1347C>T | |||||
HGVSp | CE54007:p.Leu449= | |||||
cDNA_position | 1369 | |||||
CDS_position | 1347 | |||||
Protein_position | 449 | |||||
Exon_number | 9/25 | |||||
Codon_change | ctC/ctT | |||||
Amino_acid_change | L | |||||
F10G7.10.2 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | F10G7.10.2:c.1347C>T | |||||
HGVSp | CE54007:p.Leu449= | |||||
cDNA_position | 1420 | |||||
CDS_position | 1347 | |||||
Protein_position | 449 | |||||
Exon_number | 10/26 | |||||
Codon_change | ctC/ctT | |||||
Amino_acid_change | L | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |