WormBase Tree Display for Variation: WBVar02127142

WBVar02127142 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h14097
    Other_name: C41D11.1b.1:c.*977G>A
      C41D11.6.1:c.1551C>T
      C41D11.1d.1:c.941+2505G>A
      C41D11.1c.1:c.942-2303G>A
      C41D11.1b.2:c.*182+795G>A
      CE08663:p.Phe517=
    HGVSg: CHROMOSOME_I:g.4461154G>A
  Sequence_details: SMap: S_parent: Sequence: C41D11
    Flanking_sequences: CATCCGTCGACTGCACCGCGTGATCGACCGCTGCTGGCAC AAGGTTCCGGCTGGTGTTTCGATCGAGAATTTGGTACCAT
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 4461155 4461155
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023854
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00016561
      WBGene00016565
    Transcript: C41D11.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C41D11.1d.1:c.941+2505G>A
        Intron_number: 8/9
      C41D11.1b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C41D11.1b.2:c.*182+795G>A
        Intron_number: 9/9
      C41D11.6.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C41D11.6.1:c.1551C>T
        HGVSp: CE08663:p.Phe517=
        cDNA_position: 1551
        CDS_position: 1551
        Protein_position: 517
        Exon_number: 1/1
        Codon_change: ttC/ttT
        Amino_acid_change: F
      C41D11.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C41D11.1c.1:c.942-2303G>A
        Intron_number: 7/7
      C41D11.1b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C41D11.1b.1:c.*977G>A
        cDNA_position: 2001
        Exon_number: 10/10
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose