WormBase Tree Display for Variation: WBVar02125891
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WBVar02125891 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h10996 | ||||
Other_name | C53D5.4b.1:c.837+326G>A | |||||
C53D5.4d.1:c.799-186G>A | ||||||
C53D5.4f.1:c.387+326G>A | ||||||
C53D5.4e.1:c.388-186G>A | ||||||
C53D5.4c.1:c.798+326G>A | ||||||
C53D5.4a.1:c.838-186G>A | ||||||
HGVSg | CHROMOSOME_I:g.287183C>T | |||||
Sequence_details | SMap | S_parent | Sequence | C53D5 | ||
Flanking_sequences | GGTTTCTAGGCCACGAAAAATAATTTTTTGCTTCAAACAT | CTGCTTTTTTTCCAAAATTTAGCTTTAAAAAGTCGGTGGC | ||||
Mapping_target | CHROMOSOME_I | |||||
Source_location | 200 | CHROMOSOME_I | 287183 | 287183 | ||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023707 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00016905 | ||||
Transcript | C53D5.4f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | C53D5.4f.1:c.387+326G>A | |||||
Intron_number | 1/1 | |||||
C53D5.4c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C53D5.4c.1:c.798+326G>A | |||||
Intron_number | 4/4 | |||||
C53D5.4b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C53D5.4b.1:c.837+326G>A | |||||
Intron_number | 5/6 | |||||
C53D5.4e.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C53D5.4e.1:c.388-186G>A | |||||
Intron_number | 1/2 | |||||
C53D5.4d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C53D5.4d.1:c.799-186G>A | |||||
Intron_number | 4/5 | |||||
C53D5.4a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C53D5.4a.1:c.838-186G>A | |||||
Intron_number | 5/7 | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |