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WormBase Tree Display for Variation: WBVar02125891

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Name Class

WBVar02125891EvidencePaper_evidenceWBPaper00045317
NamePublic_nameh10996
Other_nameC53D5.4b.1:c.837+326G>A
C53D5.4d.1:c.799-186G>A
C53D5.4f.1:c.387+326G>A
C53D5.4e.1:c.388-186G>A
C53D5.4c.1:c.798+326G>A
C53D5.4a.1:c.838-186G>A
HGVSgCHROMOSOME_I:g.287183C>T
Sequence_detailsSMapS_parentSequenceC53D5
Flanking_sequencesGGTTTCTAGGCCACGAAAAATAATTTTTTGCTTCAAACATCTGCTTTTTTTCCAAAATTTAGCTTTAAAAAGTCGGTGGC
Mapping_targetCHROMOSOME_I
Source_location200CHROMOSOME_I287183287183
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023707
LaboratoryKR
AnalysisWGS_Rose
StatusLive
AffectsGeneWBGene00016905
TranscriptC53D5.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53D5.4f.1:c.387+326G>A
Intron_number1/1
C53D5.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53D5.4c.1:c.798+326G>A
Intron_number4/4
C53D5.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53D5.4b.1:c.837+326G>A
Intron_number5/6
C53D5.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53D5.4e.1:c.388-186G>A
Intron_number1/2
C53D5.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53D5.4d.1:c.799-186G>A
Intron_number4/5
C53D5.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53D5.4a.1:c.838-186G>A
Intron_number5/7
ReferenceWBPaper00040589
WBPaper00000975
WBPaper00003985
WBPaper00000699
WBPaper00045317
MethodWGS_Rose