WormBase Tree Display for Variation: WBVar02125192

WBVar02125192 Name: Public_name: tm6525
    Other_name: K07A1.9e.1:c.219+214_348-13delinsG
      K07A1.9f.1:c.237+214_366-13delinsG
      K07A1.9c.1:c.*169+214_*298-13delinsG
      K07A1.9a.1:c.444+214_573-13delinsG
      K07A1.9d.1:c.441+214_570-13delinsG
      K07A1.9b.1:c.360+214_489-13delinsG
    HGVSg: CHROMOSOME_I:g.9613224_9613612delinsC
  Sequence_details: SMap: S_parent: Sequence: K07A1
    Flanking_sequences: cgacatttttcttcaaatctgtaaattgaa ttataaatatttattttctgttaatcgata
    Mapping_target: K07A1
    Source_location: 7 CHROMOSOME_I 9613223 9613613 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: C
      Deletion
    PCR_product: tm6525_external
      tm6525_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6525
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00010615
    Transcript: K07A1.9c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K07A1.9c.1:c.*169+214_*298-13delinsG
        Intron_number: 7-8/10
        Exon_number: 8/11
      K07A1.9f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K07A1.9f.1:c.237+214_366-13delinsG
        Intron_number: 2-3/5
        Exon_number: 3/6
      K07A1.9d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K07A1.9d.1:c.441+214_570-13delinsG
        Intron_number: 5-6/9
        Exon_number: 6/10
      K07A1.9e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K07A1.9e.1:c.219+214_348-13delinsG
        Intron_number: 2-3/5
        Exon_number: 3/6
      K07A1.9b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K07A1.9b.1:c.360+214_489-13delinsG
        Intron_number: 4-5/8
        Exon_number: 5/9
      K07A1.9a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K07A1.9a.1:c.444+214_573-13delinsG
        Intron_number: 5-6/9
        Exon_number: 6/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 32640/32641-C-33029/33030 (389 bp deletion + 1 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele