WormBase Tree Display for Variation: WBVar02124208
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WBVar02124208 | Name | Public_name | WBVar02124208 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00855131 | |||||||
CE47500:p.Ala232GlufsTer87 | ||||||||
CE35453:p.Ala232GlufsTer87 | ||||||||
F01G4.4a.1:c.694_695insAACTGCTCCAACAA | ||||||||
F01G4.4b.1:c.694_695insAACTGCTCCAACAA | ||||||||
HGVSg | CHROMOSOME_IV:g.11144236_11144237insAACTGCTCCAACAA | |||||||
Sequence_details | SMap | S_parent | Sequence | F01G4 | ||||
Flanking_sequences | CAAATGGTACGTCATCACAAGAACTAGCAG | CAGCTCCAAATCGGAATAACTTCCCAACAT | ||||||
Mapping_target | F01G4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 11144216 | 11144476 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | AACTGCTCCAACAA | ||||||
Tandem_duplication | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008503 | ||||||
Transcript | F01G4.4b.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | F01G4.4b.1:c.694_695insAACTGCTCCAACAA | |||||||
HGVSp | CE47500:p.Ala232GlufsTer87 | |||||||
cDNA_position | 694-695 | |||||||
CDS_position | 694-695 | |||||||
Protein_position | 232 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | gca/gAACTGCTCCAACAAca | |||||||
Amino_acid_change | A/ELLQQX | |||||||
F01G4.4a.1 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | F01G4.4a.1:c.694_695insAACTGCTCCAACAA | |||||||
HGVSp | CE35453:p.Ala232GlufsTer87 | |||||||
cDNA_position | 699-700 | |||||||
CDS_position | 694-695 | |||||||
Protein_position | 232 | |||||||
Exon_number | 5/7 | |||||||
Codon_change | gca/gAACTGCTCCAACAAca | |||||||
Amino_acid_change | A/ELLQQX | |||||||
Remark | This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous | |||||||
Method | WGS_Flibotte |