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WormBase Tree Display for Variation: WBVar02124208

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Name Class

WBVar02124208NamePublic_nameWBVar02124208
Other_namecewivar00855131
CE47500:p.Ala232GlufsTer87
CE35453:p.Ala232GlufsTer87
F01G4.4a.1:c.694_695insAACTGCTCCAACAA
F01G4.4b.1:c.694_695insAACTGCTCCAACAA
HGVSgCHROMOSOME_IV:g.11144236_11144237insAACTGCTCCAACAA
Sequence_detailsSMapS_parentSequenceF01G4
Flanking_sequencesCAAATGGTACGTCATCACAAGAACTAGCAGCAGCTCCAAATCGGAATAACTTCCCAACAT
Mapping_targetF01G4
Source_location225CHROMOSOME_IV1114421611144476From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionAACTGCTCCAACAA
Tandem_duplication
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00008503
TranscriptF01G4.4b.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScF01G4.4b.1:c.694_695insAACTGCTCCAACAA
HGVSpCE47500:p.Ala232GlufsTer87
cDNA_position694-695
CDS_position694-695
Protein_position232
Exon_number4/6
Codon_changegca/gAACTGCTCCAACAAca
Amino_acid_changeA/ELLQQX
F01G4.4a.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScF01G4.4a.1:c.694_695insAACTGCTCCAACAA
HGVSpCE35453:p.Ala232GlufsTer87
cDNA_position699-700
CDS_position694-695
Protein_position232
Exon_number5/7
Codon_changegca/gAACTGCTCCAACAAca
Amino_acid_changeA/ELLQQX
RemarkThis allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
MethodWGS_Flibotte