WormBase Tree Display for Variation: WBVar02123550
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WBVar02123550 | Name | Public_name | WBVar02123550 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00854473 | |||||||
Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_X | ||||
Flanking_sequences | TTGCAGTCAATATTTTTGAATGTACTGAAA | CATATAAGCTGCGTATTCGTATCCATCCCGTGTCATTTCTGTCCACCGATGTTTAGCGCATGCCAGCCAAAAATCGACATCATCAGCCGACGTCTGTTGTTTCAGAAATTGAACGAAAAGTTTACTGCCGTCTGAAAATTGCAGAATTAAAAAGGAACTTGAAAGCATTTCTTACATTCGCTGGCGGCAAGAGATTCCGGCGATTTCTGCCAACTGAGCACATCCTCTTGAAGTGAGAGTTTTGGAGAGCGGCGGAAAATTGAAACCGGTGATTTCAGTGCATCCCTGATACGAGTTATTGTATTTCTGCAAAAAGGTAAAATTATTGATTTAAAAAAAAAGAGCAATTCTTACCGGTTTTTCCTGATATTTCTCACTGTGATAAAATACAAAATCATCAACGCATCCTTCGTTTTGATCGGACCATTTTCCTCGACAACGCGGTGATCGGGAAACTGTCGATTCCAACATTCGATTCCCGAGGAATGGAAGAAATCCTGGTTGGTAATTTGAGGAAGATTCTGCATCCACGGATCAACGGTGGCCATAGACATTTTGAGAGAGAGAGAGAAGAAGAATGAGCGGTGTTGCGAGAGGTGGGCTGTGTTCAAATGACACGAGAAGGGTGCCCGTTTGCATTGGCGCGCAATTTCTGCATTCCCAGGAGGCATACTTAATTGAGGTCAATGTTTGCAATTGCCAAACAGGAAAAGAAAACGTTAATAGTAGGAGGAGTTTGGGTTTGTAGAAGTTGCATGAACAAAATATGGGTTTTTTCTTATCAGGTTTGCATGAAAGTCTATTAGGGACTGCAATTATAATAAGAGTCCATATTATACCTTTTGATAACTCTATGTGTACGACTGATATAGTTCCACATGTTTTTTAACGAAACACAAATATTGAAAATTGTAGAAGTTTCTAGAAGAGTCTAGAAAAGTTTTTTAACCCCCCCCCCCCCCCCACCACTAATTCTAGTTCAACTGAAAACATAATACTTGACACCACATTTTCTAGTGTAACTGAAAACATCGAAACTAAAAAAGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAATAGATTGTTACA | ||||||
Mapping_target | CHROMOSOME_X | |||||||
Source_location | 225 | CHROMOSOME_X | 1935001 | 1953000 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021988 | ||||||
WBGene00022511 | ||||||||
WBGene00018684 | ||||||||
WBGene00021987 | ||||||||
WBGene00304826 | ||||||||
WBGene00202290 | ||||||||
WBGene00004351 | ||||||||
Transcript | Y59E1A.4.1 | |||||||
F52D2.2.1 | ||||||||
F52D2.1.1 | ||||||||
Y59E1A.2.1 | ||||||||
Y59E1A.1.1 | ||||||||
ZC53.21 | ||||||||
Pseudogene | ZC53.4 | |||||||
Remark | The boundaries of this variant have been identified only approximately | |||||||
This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous | ||||||||
Method | WGS_Flibotte |