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WormBase Tree Display for Variation: WBVar02123550

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Name Class

WBVar02123550NamePublic_nameWBVar02123550
Other_namecewivar00854473
Sequence_detailsSMapS_parentSequenceCHROMOSOME_X
Flanking_sequencesTTGCAGTCAATATTTTTGAATGTACTGAAACATATAAGCTGCGTATTCGTATCCATCCCGTGTCATTTCTGTCCACCGATGTTTAGCGCATGCCAGCCAAAAATCGACATCATCAGCCGACGTCTGTTGTTTCAGAAATTGAACGAAAAGTTTACTGCCGTCTGAAAATTGCAGAATTAAAAAGGAACTTGAAAGCATTTCTTACATTCGCTGGCGGCAAGAGATTCCGGCGATTTCTGCCAACTGAGCACATCCTCTTGAAGTGAGAGTTTTGGAGAGCGGCGGAAAATTGAAACCGGTGATTTCAGTGCATCCCTGATACGAGTTATTGTATTTCTGCAAAAAGGTAAAATTATTGATTTAAAAAAAAAGAGCAATTCTTACCGGTTTTTCCTGATATTTCTCACTGTGATAAAATACAAAATCATCAACGCATCCTTCGTTTTGATCGGACCATTTTCCTCGACAACGCGGTGATCGGGAAACTGTCGATTCCAACATTCGATTCCCGAGGAATGGAAGAAATCCTGGTTGGTAATTTGAGGAAGATTCTGCATCCACGGATCAACGGTGGCCATAGACATTTTGAGAGAGAGAGAGAAGAAGAATGAGCGGTGTTGCGAGAGGTGGGCTGTGTTCAAATGACACGAGAAGGGTGCCCGTTTGCATTGGCGCGCAATTTCTGCATTCCCAGGAGGCATACTTAATTGAGGTCAATGTTTGCAATTGCCAAACAGGAAAAGAAAACGTTAATAGTAGGAGGAGTTTGGGTTTGTAGAAGTTGCATGAACAAAATATGGGTTTTTTCTTATCAGGTTTGCATGAAAGTCTATTAGGGACTGCAATTATAATAAGAGTCCATATTATACCTTTTGATAACTCTATGTGTACGACTGATATAGTTCCACATGTTTTTTAACGAAACACAAATATTGAAAATTGTAGAAGTTTCTAGAAGAGTCTAGAAAAGTTTTTTAACCCCCCCCCCCCCCCCACCACTAATTCTAGTTCAACTGAAAACATAATACTTGACACCACATTTTCTAGTGTAACTGAAAACATCGAAACTAAAAAAGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAAATAGATTGTTACACGAAAAATAGATTGTTACA
Mapping_targetCHROMOSOME_X
Source_location225CHROMOSOME_X19350011953000From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022868From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021988
WBGene00022511
WBGene00018684
WBGene00021987
WBGene00304826
WBGene00202290
WBGene00004351
TranscriptY59E1A.4.1
F52D2.2.1
F52D2.1.1
Y59E1A.2.1
Y59E1A.1.1
ZC53.21
PseudogeneZC53.4
RemarkThe boundaries of this variant have been identified only approximately
This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
MethodWGS_Flibotte