WormBase Tree Display for Variation: WBVar02119863
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WBVar02119863 | Name | Public_name | WBVar02119863 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00850761 | |||||||
T07D3.7b.1:c.1227_1236delinsCAAGCTTGTG | ||||||||
CE32063:p.CysLysLeuVal428= | ||||||||
T07D3.7a.1:c.1284_1293delinsCAAGCTTGTG | ||||||||
CE13367:p.CysLysLeuVal409= | ||||||||
HGVSg | CHROMOSOME_II:g.876345_876354delinsCAAGCTTGTG | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | TTCCGCTCCAGAGCGTGAGCGTGAGATTTG | AGCAAGGCTGAGCTCTCCGCGGATCCATTT | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 876352 | 876361 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CAAGCTTGTG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000106 | ||||||
Transcript | T07D3.7b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.7b.1:c.1227_1236delinsCAAGCTTGTG | |||||||
HGVSp | CE13367:p.CysLysLeuVal409= | |||||||
cDNA_position | 1228-1238 | |||||||
CDS_position | 1226-1236 | |||||||
Protein_position | 409-412 | |||||||
Exon_number | 5/8 | |||||||
Codon_change | tGTAAGCTAGTA/tGCAAGCTTGTG | |||||||
Amino_acid_change | CKLV | |||||||
T07D3.7a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.7a.1:c.1284_1293delinsCAAGCTTGTG | |||||||
HGVSp | CE32063:p.CysLysLeuVal428= | |||||||
cDNA_position | 1283-1293 | |||||||
CDS_position | 1283-1293 | |||||||
Protein_position | 428-431 | |||||||
Exon_number | 5/8 | |||||||
Codon_change | tGTAAGCTAGTA/tGCAAGCTTGTG | |||||||
Amino_acid_change | CKLV | |||||||
Method | WGS_Flibotte |