WormBase Tree Display for Variation: WBVar02117965
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| WBVar02117965 | Name | Public_name | WBVar02117965 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00848776 | |||||||
| CE39299:p.Asp214_Val229delinsGlnIleGluAsnIlePheHisPheGlnGlnPheLysIleGlnLeuAla | ||||||||
| Y61B8A.4.1:c.640_686delinsCAAATAGAGAACATCTTCCATTTTCAACAATTTAAAATACAACTGGC | ||||||||
| HGVSg | CHROMOSOME_V:g.17259865_17259911delinsCAAATAGAGAACATCTTCCATTTTCAACAATTTAAAATACAACTGGC | |||||||
| Sequence_details | SMap | S_parent | Sequence | K10G4 | ||||
| Flanking_sequences | GTGATAGCTCTTGACAAACAGAGTTTGCTG | TCGGATTTCTAGAGAAGAATTGGTGAAGAT | ||||||
| Mapping_target | K10G4 | |||||||
| Source_location | 225 | CHROMOSOME_V | 17259840 | 17259886 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Insertion | CAAATAGAGAACATCTTCCATTTTCAACAATTTAAAATACAACTGGC | ||||||
| Deletion | ||||||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00044654 | ||||||
| Transcript | Y61B8A.4.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | |||||||
| HGVSc | Y61B8A.4.1:c.640_686delinsCAAATAGAGAACATCTTCCATTTTCAACAATTTAAAATACAACTGGC | |||||||
| HGVSp | CE39299:p.Asp214_Val229delinsGlnIleGluAsnIlePheHisPheGlnGlnPheLysIleGlnLeuAla | |||||||
| cDNA_position | 652-699 | |||||||
| CDS_position | 639-686 | |||||||
| Protein_position | 213-229 | |||||||
| Exon_number | 3/5 | |||||||
| Codon_change | ctGGATATAGGAAATATCTTCCATTTACATCAATTTAAGTTACAATTGGTt/ctGCAAATAGAGAACATCTTCCATTTTCAACAATTTAAAATACAACTGGCt | |||||||
| Amino_acid_change | LDIGNIFHLHQFKLQLV/LQIENIFHFQQFKIQLA | |||||||
| Method | WGS_Flibotte |
