WormBase Tree Display for Variation: WBVar02115338
expand all nodes | collapse all nodes | view schema
WBVar02115338 | Name | Public_name | WBVar02115338 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00846056 | |||||||
K11D12.10c.1:c.1454+19_1455-22delinsGTAGTTTTTTTAAAA | ||||||||
K11D12.10d.1:c.1454+19_1455-22delinsGTAGTTTTTTTAAAA | ||||||||
K11D12.10b.1:c.1454+19_1455-22delinsGTAGTTTTTTTAAAA | ||||||||
K11D12.10a.1:c.1454+19_1455-22delinsGTAGTTTTTTTAAAA | ||||||||
HGVSg | CHROMOSOME_V:g.5061180_5061194delinsTTTTAAAAAAACTAC | |||||||
Sequence_details | SMap | S_parent | Sequence | Y58A7A | ||||
Flanking_sequences | TCGAATTCCCTGAAATCGACAGTTATTATT | TTTTTTTGTAAAACTAACTCTTTGGTCTTA | ||||||
Mapping_target | Y58A7A | |||||||
Source_location | 225 | CHROMOSOME_V | 5061165 | 5061179 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTTTAAAAAAACTAC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003374 | ||||||
Transcript | K11D12.10d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | K11D12.10d.1:c.1454+19_1455-22delinsGTAGTTTTTTTAAAA | |||||||
Intron_number | 9/15 | |||||||
K11D12.10b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K11D12.10b.1:c.1454+19_1455-22delinsGTAGTTTTTTTAAAA | |||||||
Intron_number | 10/17 | |||||||
K11D12.10c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K11D12.10c.1:c.1454+19_1455-22delinsGTAGTTTTTTTAAAA | |||||||
Intron_number | 10/18 | |||||||
K11D12.10a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | K11D12.10a.1:c.1454+19_1455-22delinsGTAGTTTTTTTAAAA | |||||||
Intron_number | 10/17 | |||||||
Method | WGS_Flibotte |