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WormBase Tree Display for Variation: WBVar02115271

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Name Class

WBVar02115271NamePublic_nameWBVar02115271
Other_namecewivar00845982
Y45G5AM.3a.1:c.171_183delinsGATTTTGAACGAG
CE48088:p.Val58Ile
Y45G5AM.3a.2:c.171_183delinsGATTTTGAACGAG
HGVSgCHROMOSOME_V:g.4165014_4165026delinsGATTTTGAACGAG
Sequence_detailsSMapS_parentSequenceY45G5AM
Flanking_sequencesCAAATCGATTGGGGGATTCGAGAAATGGTCGATTGTCGGAGGGAAGTTGTCAAAAATATG
Mapping_targetY45G5AM
Source_location225CHROMOSOME_V41650004165012From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionGATTTTGAACGAG
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021556
TranscriptY45G5AM.3a.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScY45G5AM.3a.1:c.171_183delinsGATTTTGAACGAG
HGVSpCE48088:p.Val58Ile
cDNA_position304-317
CDS_position170-183
Protein_position57-61
Exon_number3/6
Codon_changetCTGTTCTGAATGAA/tCGATTTTGAACGAG
Amino_acid_changeSVLNE/SILNE
Y45G5AM.3a.2VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScY45G5AM.3a.2:c.171_183delinsGATTTTGAACGAG
HGVSpCE48088:p.Val58Ile
cDNA_position185-198
CDS_position170-183
Protein_position57-61
Exon_number2/5
Codon_changetCTGTTCTGAATGAA/tCGATTTTGAACGAG
Amino_acid_changeSVLNE/SILNE
MethodWGS_Flibotte