WormBase Tree Display for Variation: WBVar02115271
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WBVar02115271 | Name | Public_name | WBVar02115271 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00845982 | |||||||
Y45G5AM.3a.1:c.171_183delinsGATTTTGAACGAG | ||||||||
CE48088:p.Val58Ile | ||||||||
Y45G5AM.3a.2:c.171_183delinsGATTTTGAACGAG | ||||||||
HGVSg | CHROMOSOME_V:g.4165014_4165026delinsGATTTTGAACGAG | |||||||
Sequence_details | SMap | S_parent | Sequence | Y45G5AM | ||||
Flanking_sequences | CAAATCGATTGGGGGATTCGAGAAATGGTC | GATTGTCGGAGGGAAGTTGTCAAAAATATG | ||||||
Mapping_target | Y45G5AM | |||||||
Source_location | 225 | CHROMOSOME_V | 4165000 | 4165012 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GATTTTGAACGAG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021556 | ||||||
Transcript | Y45G5AM.3a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y45G5AM.3a.1:c.171_183delinsGATTTTGAACGAG | |||||||
HGVSp | CE48088:p.Val58Ile | |||||||
cDNA_position | 304-317 | |||||||
CDS_position | 170-183 | |||||||
Protein_position | 57-61 | |||||||
Exon_number | 3/6 | |||||||
Codon_change | tCTGTTCTGAATGAA/tCGATTTTGAACGAG | |||||||
Amino_acid_change | SVLNE/SILNE | |||||||
Y45G5AM.3a.2 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | Y45G5AM.3a.2:c.171_183delinsGATTTTGAACGAG | |||||||
HGVSp | CE48088:p.Val58Ile | |||||||
cDNA_position | 185-198 | |||||||
CDS_position | 170-183 | |||||||
Protein_position | 57-61 | |||||||
Exon_number | 2/5 | |||||||
Codon_change | tCTGTTCTGAATGAA/tCGATTTTGAACGAG | |||||||
Amino_acid_change | SVLNE/SILNE | |||||||
Method | WGS_Flibotte |