WormBase Tree Display for Variation: WBVar02113956
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WBVar02113956 | Name | Public_name | WBVar02113956 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00844631 | |||||||
Y58A7A.5.1:c.411_459delinsAAAGAATGGATTGGAACAATTTGGAGTCATTCATGAAGAAAAATCAACG | ||||||||
CE52419:p.Ala142_Pro149delinsGluGlnPheGlyValIleHisGlu | ||||||||
HGVSg | CHROMOSOME_V:g.5086447_5086495delinsCGTTGATTTTTCTTCATGAATGACTCCAAATTGTTCCAATCCATTCTTT | |||||||
Sequence_details | SMap | S_parent | Sequence | Y58A7A | ||||
Flanking_sequences | TTTGTTAAGAACTCTTGAGTGAACAGCAAA | TCAACAACTTCTGCATTCACATTTTCTGGA | ||||||
Mapping_target | Y58A7A | |||||||
Source_location | 225 | CHROMOSOME_V | 5086432 | 5086480 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CGTTGATTTTTCTTCATGAATGACTCCAAATTGTTCCAATCCATTCTTT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021979 | ||||||
Transcript | Y58A7A.5.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y58A7A.5.1:c.411_459delinsAAAGAATGGATTGGAACAATTTGGAGTCATTCATGAAGAAAAATCAACG | |||||||
HGVSp | CE52419:p.Ala142_Pro149delinsGluGlnPheGlyValIleHisGlu | |||||||
cDNA_position | 427-476 | |||||||
CDS_position | 411-460 | |||||||
Protein_position | 137-154 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | gaGAAAAATGGATTGGCGCAATTTGGATTCATCTACCCAGAGAAGTCAACTTtt/gaAAAGAATGGATTGGAACAATTTGGAGTCATTCATGAAGAAAAATCAACGTtt | |||||||
Amino_acid_change | EKNGLAQFGFIYPEKSTF/EKNGLEQFGVIHEEKSTF | |||||||
Method | WGS_Flibotte |