WormBase Tree Display for Variation: WBVar02112749
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WBVar02112749 | Name | Public_name | WBVar02112749 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00843384 | |||||||
CE41177:p.Tyr71GlufsTer8 | ||||||||
Y37H2A.13.1:c.209_218del | ||||||||
HGVSg | CHROMOSOME_V:g.18143118_18143127del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y37H2A | ||||
Flanking_sequences | AATATCTTGGTGGTACAACCGAATTCAGCC | CGGAAATTACTACTCGGTTAATATAGACGC | ||||||
Mapping_target | Y37H2A | |||||||
Source_location | 225 | CHROMOSOME_V | 18143090 | 18143099 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00045417 | ||||||
Transcript | Y37H2A.13.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y37H2A.13.1:c.209_218del | |||||||
HGVSp | CE41177:p.Tyr71GlufsTer8 | |||||||
cDNA_position | 226-235 | |||||||
CDS_position | 209-218 | |||||||
Protein_position | 70-73 | |||||||
Exon_number | 3/6 | |||||||
Codon_change | cCATATGGACAc/cc | |||||||
Amino_acid_change | PYGH/X | |||||||
Method | WGS_Flibotte |