WormBase Tree Display for Variation: WBVar02106982
expand all nodes | collapse all nodes | view schema
WBVar02106982 | Name | Public_name | WBVar02106982 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00837410 | |||||||
Y56A3A.2.1:c.678+115_678+149delinsTTCCATTAATTTTTTGGAAATTCGAAAATCGA | ||||||||
HGVSg | CHROMOSOME_III:g.11856696_11856730delinsTCGATTTTCGAATTTCCAAAAAATTAATGGAA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y56A3A | ||||
Flanking_sequences | AAAATCGAAAAAAAAAATCGATTAAAAAAA | TTTTTTTTTTGAATTTTTTCACATTGATAA | ||||||
Mapping_target | Y56A3A | |||||||
Source_location | 225 | CHROMOSOME_III | 11856596 | 11856630 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TCGATTTTCGAATTTCCAAAAAATTAATGGAA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013225 | ||||||
Transcript | Y56A3A.2.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y56A3A.2.1:c.678+115_678+149delinsTTCCATTAATTTTTTGGAAATTCGAAAATCGA | |||||||
Intron_number | 5/9 | |||||||
Method | WGS_Flibotte |