WormBase Tree Display for Variation: WBVar02105587
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WBVar02105587 | Name | Public_name | WBVar02105587 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00835969 | |||||||
Y113G7B.9.1:c.-6_22delinsCAATTATGGAAATCGCCATAACATTTC | ||||||||
HGVSg | CHROMOSOME_V:g.20206664_20206691delinsCAATTATGGAAATCGCCATAACATTTC | |||||||
Sequence_details | SMap | S_parent | Sequence | Y113G7B | ||||
Flanking_sequences | ATTTTATGTAAAACTAATAATTTTCTAAAA | TGTGTTTGCTGGGAATTATCAGTGCAATTA | ||||||
Mapping_target | Y113G7B | |||||||
Source_location | 225 | CHROMOSOME_V | 20206633 | 20206660 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CAATTATGGAAATCGCCATAACATTTC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013760 | ||||||
Transcript | Y113G7B.9.1 | VEP_consequence | start_lost,5_prime_UTR_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y113G7B.9.1:c.-6_22delinsCAATTATGGAAATCGCCATAACATTTC | |||||||
cDNA_position | 347-374 | |||||||
CDS_position | ?-22 | |||||||
Protein_position | ?-8 | |||||||
Exon_number | 1-2/7 | |||||||
Method | WGS_Flibotte |