WormBase Tree Display for Variation: WBVar02102468
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WBVar02102468 | Name | Public_name | WBVar02102468 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00832743 | |||||||
CE54312:p.Val158delinsLeuGlnIle | ||||||||
Y48G1BM.10.1:c.471_475delinsACTCCAAATAC | ||||||||
HGVSg | CHROMOSOME_I:g.231772_231776delinsGTATTTGGAGT | |||||||
Sequence_details | SMap | S_parent | Sequence | Y48G1BM | ||||
Flanking_sequences | TCTTGGCGATCCTTGGTTGGTATCGGCGTC | GGCTGGTGTTGTTGCTGCTGTTGCTGGAGT | ||||||
Mapping_target | Y48G1BM | |||||||
Source_location | 225 | CHROMOSOME_I | 231772 | 231776 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GTATTTGGAGT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00306121 | ||||||
Transcript | Y48G1BM.10.1 | VEP_consequence | protein_altering_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y48G1BM.10.1:c.471_475delinsACTCCAAATAC | |||||||
HGVSp | CE54312:p.Val158delinsLeuGlnIle | |||||||
cDNA_position | 2163-2167 | |||||||
CDS_position | 471-475 | |||||||
Protein_position | 157-159 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | ccGGTCAga/ccACTCCAAATACga | |||||||
Amino_acid_change | PVR/PLQIR | |||||||
Method | WGS_Flibotte |