WormBase Tree Display for Variation: WBVar02102074
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WBVar02102074 | Name | Public_name | WBVar02102074 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00832341 | |||||||
F40G9.5.1:c.-12_4delinsCCAAAAAAAAAAACACCTTTTCGCCCACAAGATGC | ||||||||
HGVSg | CHROMOSOME_III:g.183333_183348delinsCCAAAAAAAAAAACACCTTTTCGCCCACAAGATGC | |||||||
Sequence_details | SMap | S_parent | Sequence | F40G9 | ||||
Flanking_sequences | CTATTTTATTGATTTTTTTGTACTTTTTTT | TTCAAGTAATACTGTATTTCACTTTAAATT | ||||||
Mapping_target | F40G9 | |||||||
Source_location | 225 | CHROMOSOME_III | 183332 | 183347 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CCAAAAAAAAAAACACCTTTTCGCCCACAAGATGC | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018241 | ||||||
Transcript | F40G9.5.1 | VEP_consequence | start_lost,5_prime_UTR_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | F40G9.5.1:c.-12_4delinsCCAAAAAAAAAAACACCTTTTCGCCCACAAGATGC | |||||||
cDNA_position | 2071-2086 | |||||||
CDS_position | ?-4 | |||||||
Protein_position | ?-2 | |||||||
Exon_number | 1-2/7 | |||||||
Method | WGS_Flibotte |