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WormBase Tree Display for Variation: WBVar02102053

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Name Class

WBVar02102053NamePublic_nameWBVar02102053
Other_namecewivar00832320
C29F9.6.3:c.136-4_162delinsTGCAGATAACTCAGCAGTGCCCAGTTCAGAAT
C29F9.6.1:c.136-4_162delinsTGCAGATAACTCAGCAGTGCCCAGTTCAGAAT
C29F9.6.2:c.136-4_162delinsTGCAGATAACTCAGCAGTGCCCAGTTCAGAAT
HGVSgCHROMOSOME_III:g.115794_115824delinsTGCAGATAACTCAGCAGTGCCCAGTTCAGAAT
Sequence_detailsSMapS_parentSequenceC29F9
Flanking_sequencesTCTAAAGACTCGATTCTCTAGTTTGATTTTTGCTCCACGATGAAGGAGGTGATCGGGCAT
Mapping_targetC29F9
Source_location225CHROMOSOME_III115793115823From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionTGCAGATAACTCAGCAGTGCCCAGTTCAGAAT
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016221
TranscriptC29F9.6.1VEP_consequencesplice_acceptor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScC29F9.6.1:c.136-4_162delinsTGCAGATAACTCAGCAGTGCCCAGTTCAGAAT
cDNA_position?-334
CDS_position?-162
Protein_position?-54
Intron_number5/8
Exon_number6/9
C29F9.6.3VEP_consequencesplice_acceptor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScC29F9.6.3:c.136-4_162delinsTGCAGATAACTCAGCAGTGCCCAGTTCAGAAT
cDNA_position?-257
CDS_position?-162
Protein_position?-54
Intron_number4/7
Exon_number5/8
C29F9.6.2VEP_consequencesplice_acceptor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScC29F9.6.2:c.136-4_162delinsTGCAGATAACTCAGCAGTGCCCAGTTCAGAAT
cDNA_position?-309
CDS_position?-162
Protein_position?-54
Intron_number3/6
Exon_number4/7
MethodWGS_Flibotte