WormBase Tree Display for Variation: WBVar02101199
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WBVar02101199 | Name | Public_name | WBVar02101199 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00831442 | |||||||
F40G9.5.1:c.732_747delinsTTGGTCGGAAGACGAG | ||||||||
CE42113:p.Thr246Ser | ||||||||
HGVSg | CHROMOSOME_III:g.184780_184795delinsTTGGTCGGAAGACGAG | |||||||
Sequence_details | SMap | S_parent | Sequence | F40G9 | ||||
Flanking_sequences | CATCATCCACGTGTCGGAAATTATTCGGAA | CTTTTTCCGAAATATTATGCACAGTTTTAC | ||||||
Mapping_target | F40G9 | |||||||
Source_location | 225 | CHROMOSOME_III | 184779 | 184794 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TTGGTCGGAAGACGAG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018241 | ||||||
Transcript | F40G9.5.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F40G9.5.1:c.732_747delinsTTGGTCGGAAGACGAG | |||||||
HGVSp | CE42113:p.Thr246Ser | |||||||
cDNA_position | 2813-2829 | |||||||
CDS_position | 731-747 | |||||||
Protein_position | 244-249 | |||||||
Exon_number | 6/7 | |||||||
Codon_change | aACTGGACGGAAGATGAA/aATTGGTCGGAAGACGAG | |||||||
Amino_acid_change | NWTEDE/NWSEDE | |||||||
Method | WGS_Flibotte |